Cui, X., D. Yang, A. J. Miller, B. Yin and J. Yang, 2024: Trough-scale slope countercurrent over the East China Sea shelf break driven by upwelling divergence. Journal of Geophysical Research-Oceans, 129, e2023JC020743.

DeFlorio, M. J., A. Sengupta, C. M. Castellano, J. Wang, Z. Zhang, A. Gershunov, K. Guirguis, R. Luna Nino, R. E. S. Clemesha, M. Pan, M. Xiao, B. Kawzenuk, P. B. Gibson, W. Scheftic, P. D. Broxton, M. B. Switanek, J. Yuan, M. D. Dettinger, C. W. Hecht, D. R. Cayan, B. D. Cornuelle, A. J. Miller, J. Kalansky, L. Delle Monache, F. M. Ralph, D. E. Waliser, A. W. Robertson, X. Zeng, D. G. DeWitt, J. Jones and M. L. Anderson, 2024: From California's extreme drought to major flooding: Evaluating and synthesizing experimental seasonal and subseasonal forecasts of landfalling atmospheric rivers and extreme precipitation during Winter 2022-2023. Bulletin of the American Meteorological Society, 105, E84-E104.

Sun, R., A. Cobb, A. B. Villas Boas, S. Langodan, A. C. Subramanian, M. R. Mazloff, B. D. Cornuelle, A. J. Miller, R. Pathak and I. Hoteit, 2023: Waves in SKRIPS: WaveWatch III coupling implementation and a case study of cyclone Mekunu. Geoscientific Model Development, 16, 3435-3458.

Ghosh, S., A. J. Miller, A. C. Subramaniam, R. Bhatla and S. Das, 2023: Signals of northward propagating Monsoon Intraseasonal Oscillations (MISOs) in the RegCM4.7 CORDEX-CORE simulation over South Asia domain. Climate Dynamics, 61, 3237-3251.

Beaudin, E., E. Di Lorenzo, A. J. Miller, H. Seo and Y. Joh, 2023: Impact of extratropical Northeast Pacific SST on U.S. West Coast precipitation. Geophysical Research Letters, 50, e2022GL102354.

Pezzi, L. P., M. F. L. Quadro, E. B. Souza, A. J. Miller, V. B. Rao, E. B. Rosa, M. F. Santini, A. Bender, R. B. Souza, M. J. Cabrera, C. K. Parise, J. T. Carvalho, L. S. Lima, M. R. L. de Quadros, D. M. Nehme and J. F. Antonio, 2023: Oceanic SACZ produces an abnormally wet 2021/2022 rainy season in South America. Scientific Reports, 13, 1455.

Di Lorenzo, E., T. Xu, Y. Zhao, M. Newman, A. Capotondi, S. Stevenson, D. J. Amaya, B.T. Anderson, R. Ding, J.C. Furtado, Y. Joh, G. Liguori, J. Lou, A. J. Miller, G. Navarra, N. Schneider, D. J. Vimont, S. Wu and H. Zhang, 2023: Modes and mechanisms of Pacific decadal-scale variability. Annual Review of Marine Science, 15, 249-75.

Zhang, Y., S. Yu, S.-P. Xie, D. J. Amaya, Q. Peng, Y. Kosaka, X. Lin, J.-C. Yang, S. M. Larson, A. J. Miller and L. Fan, 2022: Role of ocean dynamics in Equatorial Pacific decadal variability. Climate Dynamics, 59, 2517-2529.

Pezzi, L. P., M. F. L. Quadro, J. A. Lorenzzetti, A. J. Miller, E. B. Rosa, L. N. Lima and U. A. Sutil, 2022: The effect of Oceanic South Atlantic Convergence Zone episodes on regional SST anomalies: The roles of heat fluxes and upper-ocean dynamics. Climate Dynamics, 59, 2041-2065.

Ducklow, H., M. Cimino, K. O. Denton, W. R. Fraser, R. R. Hopcroft, R. Ji, A. J. Miller, M. D. Ohman and H. M. Sosik, 2022: Marine pelagic ecosystem responses to climate variability and change. BioScience, 72, 827-850.

Sun, R. A. B. Villas Boas, A. C. Subramanian, B. D. Cornuelle, M. R. Mazloff, A. J. Miller, S. Langodan and I. Hoteit, 2022: Focusing and defocusing of tropical cyclone generated waves by ocean current refraction. Journal of Geophysical Research-Oceans, 127, e2021JC018112.

Cordero-Quiros, N., A. J. Miller, Y. Pan, L. Balitaan, E. Curchitser and R. Dussin, 2022: Physical-ecological response of the California Current System to ENSO events in ROMS-NEMURO. Ocean Dynamics, 72, 21-36.

Kumar, N., J. A. Lerczak, T. Xu, A. F. Waterhouse, J. Thomson, E. J. Terrill, C. Swann, S. H. Suanda, M. S. Spydell, P. B. Smit, A. Simpson, R. Romeiser, S. D. Pierce, T. de Paolo, A. Palóczy, A. O'Dea, L. Nyman, J. N. Moum, M. Moulton, A. M. Moore, A. J. Miller, R. S. Mieras, S. T. Merrifield, K. Melville, J. M. McSweeney, J. MacMahan, J. A. MacKinnon, B. Lund, E. Di Lorenzo, L. Lenain, M. Kovatch, T. T. Janssen, S. Haney, M. C. Haller, K. Haas, D. J. Grimes, H. C. Graber, M. K. Gough, D. A. Fertitta, F. Feddersen, C. A. Edwards, W. Crawford, J. Colosi, C. C. Chickadel, S. Celona, J. Calantoni, E. F. Braithwaite III, J. Becherer, J. A. Barth and S. Ahn, 2021: The Inner-Shelf Dynamics Experiment. Bulletin of the American Meteorological Society, 102, E1033-E1063.

Pezzi, L. P., R. B. de Souza, M. F. Santini, A. J. Miller, J. T. Carvalho, C. K. Parise, M. F. Quadro, E. B. Rosa, F. Justino, U. A. Sutil, M. J. Cabrera, A. V. Babanin, J. Voermans, E. L. Nascimento, R. C. M. Alves, G. B. Munchow and J. Rubert, 2021: Oceanic eddy-induced modifications to air-sea heat and CO2 fluxes in the Brazil-Malvinas Confluence. Scientific Reports, 11, 10648.

Zhang, Y. S. Yu, D. J. Amaya, Y. Kosaka, S. M. Larson, X. Wang, J.-C. Yang, M. F. Stuecker, S.-P. Xie, A. J. Miller and X. Lin, 2021: Pacific Meridional Modes without Equatorial Pacific influence. Journal of Climate, 34 5285-5301.

Sun, R., A. C. Subramanian, B. D. Cornuelle, M. R. Mazloff, A. J. Miller, F. M. Ralph, H. Seo and I. Hoteit, 2021: The role of air-sea interactions in Atmospheric Rivers: Case studies using the SKRIPS regional coupled model. Journal of Geophysical Research-Atmospheres, 126, e2020JD032885.

Ajoku, O., A. J. Miller and J. R. Norris, 2021: Impacts of aerosols produced by biomass burning on the Stratocumulus-to-Cumulus Transition in the equatorial Atlantic. Atmospheric Science Letters, 22, e1025.

Amaya, D. J., M. A. Alexander, A. Capotondi, C. Deser, K. B. Karnauskas, A. J. Miller and N. J. Mantua, 2021: Are long-term changes in mixed layer depth influencing North Pacific marine heatwaves? Bulletin of the American Meteorological Society, 102, S59-S66.

Schmidt, D. F., D. J. Amaya, K. M. Grise and A. J. Miller, 2020: Impacts of shifting subtropical highs on the California and Canary Current Systems. Geophysical Research Letters, 47, e2020GL088996.

Amaya, D. J., A. J. Miller, S.-P. Xie and Y. Kosaka, 2020: Physical drivers of the summer 2019 North Pacific marine heatwave. Nature Communications, 11, 1903.

Hell, M. C., S. Gille, B. Cornuelle, A. J. Miller, P. D. Bromirski and A. D. Crawford, 2020: Estimating Southern Ocean storm positions with seismic observations. Journal of Geophysical Research-Oceans, 125, e2019JC015898.

Gopalakrishnan, G., A. C. Subramanian, A. J. Miller, H. Seo and D. Sengupta, 2020: Estimation and prediction of the upper ocean circulation in the Bay of Bengal. Deep-Sea Research II, 172, 104721.

Jacox, M.G., M. A. Alexander, S. Siedlecki, K. Chen, Y.-O. Kwon, S. Brodie, I. Ortiz, D. Tommasi, M. J. Widlansky, D. Barrie, A. Capotondi, W. Cheng, E. Di Lorenzo, C. Edwards, J. Fiechter, P. Fratantoni, E. L. Hazen, A. J. Hermann, A. Kumar, A. J. Miller, D. Pirhalla, M. Pozo Buil, S. Ray, S. C. Sheridan, A. Subramanian, P. Thompson, L. Thorne, H. Annamalai, S. J. Bograd, R. B. Griffis, H. Kim, A. Mariotti, M. Merrifield and R. Rykaczewski, 2020: Seasonal-to-interannual prediction of North American coastal marine ecosystems: Forecast methods, mechanisms of predictability, and priority developments. Progress in Oceanography, 183, 102307.

Eliashiv, J., A. C. Subramanian and A. J. Miller, 2020: A Reliability Budget analysis of CESM-DART. Journal of Advances in Modeling Earth Systems, 12, e2019MS001678.

Eliashiv, J., A. C. Subramanian and A. J. Miller, 2020: Tropical climate variability in the Community Earth System Model: Data Assimilation Research Testbed. Climate Dynamics, 54, 793-806.

Ajoku, O., J. R. Norris and A. J. Miller, 2020: Observed monsoon precipitation suppression caused by anomalous interhemispheric aerosol transport. Climate Dynamics, 54, 1077-1091.

Hell, M. C., B. D. Cornuelle, S. Gille, A. J. Miller and P. D. Bromirski, 2019: Identifying ocean swell generation events from Ross Ice Shelf seismic data. Journal of Atmospheric and Oceanic Technology, 36, 2171-2189.

Capotondi, A., M. Jacox, C. Bowler, M. Kavanaugh, P. Lehodey, D. Barrie, S. Brodie, S. Chaffron, W. Cheng, D. Faggiani Dias, D. Eveillard, L. Guidi, D. Iudicone, N. Lovenduski, J. A. Nye, I. Ortiz, D. E. Pirhalla, M. Pozo Buil, V. Saba, S. C. Sheridan, S. Siedlecki, A. Subramanian, C. De Vargas, E. Di Lorenzo, S. C. Doney, A. J. Hermann, T. Joyce, M. Merrifield, A. J. Miller, F. Not, S. Pesant, 2019: Observational needs supporting marine ecosystems modeling and forecasting: From the global ocean to regional and coastal systems. Frontiers in Marine Science, 6, 623.

Cordero-Quiros, N., A. J. Miller, A. C. Subramanian, J. Y. Luo and A. Capotondi, 2019: Composite physical-biological El Nino and La Nina conditions in the California Current System in CESM1-POP2-BEC. Ocean Modelling, 142, 101439.

Amaya, D. J., Y. Kosaka, W. Zhou, Y. Zhang, S.-P. Xie and A. J. Miller, 2019: The North Pacific pacemaker effect on historical ENSO and its mechanisms. Journal of Climate, 32, 7643-7661.

Sun, R., A. C. Subramanian, A. J. Miller, M. R. Mazloff, I. Hoteit and B. D. Cornuelle, 2019: SKRIPS v1.0: A regional coupled ocean-atmosphere modeling framework (MITgcm-WRF) using ESMF/NUOPC, description and preliminary results for the Red Sea. Geoscientific Model Development, 12, 4221-4244.

Sanchez, S. C., D. J. Amaya, A. J. Miller, S.-P. Xie and C. D. Charles, 2019: The Pacific Meridional Mode over the last millennium. Climate Dynamics, 53, 3547-3560.

Kumar, N., S. H. Suanda, J. A. Colosi, K. Haas, E. Di Lorenzo, A. J. Miller and C. A. Edwards, 2019: Coastal semidiurnal internal tidal incoherence in the Santa Maria Basin, California: Observations and model simulations. Journal of Geophysical Research-Oceans, 124, 5158-5179.

Capotondi, A., P. D. Sardeshmukh, E. Di Lorenzo, A. Subramanian and A. J. Miller, 2019: Predictability of US West Coast Ocean Temperatures is not solely due to ENSO. Scientific Reports, 9, 10993.

Dias, D. F., A. Subramanian, L. Zanna and A. J. Miller, 2019: Remote and local influences in forecasting Pacific SST: A Linear Inverse Model and a multimodel ensemble study Climate Dynamics, 52, 3183-3201.

Lennert-Cody, C. E., S. C. Clarke, A. Aires-da-Silva, M. N. Maunder, P. J. S. Franks, M. Román, A. J. Miller and M. Minami, 2019: The importance of environment and life stage on interpretation of silky shark relative abundance indices for the equatorial Pacific Ocean. Fisheries Oceanography, 28, 43-53.

Kilpatrick, T., S.-P. Xie, A. J. Miller and N. Schneider, 2018: Satellite observations of enhanced chlorophyll variability in the Southern California Bight. Journal of Geophysical Research-Oceans, 123, 7550-7563.

Amaya, D., N. Siler, S.-P. Xie and A. J. Miller, 2018: The interplay of internal and forced modes of Hadley Cell expansion: Lessons from the global warming hiatus. Climate Dynamics, 51, 305-319.

Yi, D. L., B. Gan, L. Wu and A. J. Miller, 2018: The North Pacific Gyre Oscillation and mechanisms of its decadal variability in CMIP5 models. Journal of Climate, 31, 2487-2509.

Stukel, M. R., H. Song, R. Goericke and A. J. Miller, 2018: The role of subduction and gravitational sinking in particle export, carbon sequestration, and the remineralization length scale in the California Current Ecosystem. Limnology and Oceanography, 63, 363-383.

Pullen, J., R. Allard, H. Seo, A. J. Miller, S. Chen, L. P. Pezzi, T. Smith, P. Chu, J. Alves and R. Caldeira, 2017: Coupled ocean-atmosphere forecasting at short and medium time scales. Journal of Marine Research, 75, 877-921.

Miller, A. J., M. Collins, S. Gualdi, T. G. Jensen, V. Misra, L. P. Pezzi, D. W. Pierce, D. Putrasahan, H. Seo and Y.-H. Tseng, 2017: Coupled ocean-atmosphere modeling and predictions. Journal of Marine Research, 75, 361-402.

Amaya, D., M. J. DeFlorio, A. J. Miller and S.-P. Xie, 2017: WES feedback and the Atlantic Meridional Mode: Observations and CMIP5 comparisons. Climate Dynamics, 49, 1665-1679.

Gan, B., L. Wu, F. Jia, S. Li, W. Cai, H. Nakamura, M. A. Alexander and A. J. Miller, 2017: On the response of the Aleutian Low to greenhouse warming. Journal of Climate, 30, 3907-3925.

Stukel, M. R., L. I. Aluwihare, K. A. Barbeau, A. M. Chekalyuk, R. Goericke, A. J. Miller, M. D. Ohman, A. Ruacho, H. Song, B. M. Stephens and M. R. Landry, 2017: Mesoscale ocean fronts enhance carbon export due to gravitational sinking and subduction. Proceedings of the National Academy of Sciences, 114, 1252-1257.

Bromirski, P. D., R. E. Flick and A. J. Miller, 2017: Storm surge along the Pacific Coast of North America. Journal of Geophysical Research-Oceans, 122, 441-457.

Amaya, D. J., N. E. Bond, A. J. Miller and M. J. DeFlorio, 2016: The evolution and known atmospheric forcing mechanisms behind the 2013-2015 North Pacific warm anomalies. U.S. CLIVAR Variations, 14, 1-6.

Suanda, S., N. Kumar, A. J. Miller, E. Di Lorenzo, K. Haas, D. Cai, C. A. Edwards, L. Washburn, M. Fewings, R. Torres and F. Feddersen, 2016: Wind relaxation and a coastal buoyant plume north of Pt. Conception, CA: Observations, simulations, and scalings. Journal of Geophysical Research-Oceans, 121, 7455-7475.

Yang, Y., L. M. Russell, L. Xu, S. Lou, M. A. Lamjiri, R. C. J. Somerville, A. J. Miller, D. R. Cayan, M. J. DeFlorio, S. J. Ghan, Y. Liu, B. Singh, H. Wang, J.-H. Yoon and P. J. Rasch, 2016: Impacts of ENSO events on cloud radiative effects in preindustrial conditions: Changes in cloud fraction and their dependence on interactive aerosol emissions and concentrations. Journal of Geophysical Research-Atmospheres, 121, 6321-6335.

Pezzi, L. P., R. B. Souza, P. C. Farias, O. Acevedo and A. J. Miller, 2016: Air-sea interaction at the Southern Brazilian Continental Shelf: In situ observations. Journal of Geophysical Research-Oceans, 121, 6671-6695.

Lou, S., L. M. Russell, Y. Yang, L. Xu, M. A. Lamjiri, M. DeFlorio, A. J. Miller, S. J. Ghan, Y. Liu and B. Singh, 2016: Impacts of the East Asian Monsoon on springtime dust concentrations over China. Journal of Geophysical Research-Atmospheres, 121, 8137-8152.

Newman, M., M. A. Alexander, T. R. Ault, K. M. Cobb, C. Deser, E. Di Lorenzo, N. J. Mantua, A. J. Miller, S. Minobe, H. Nakamura, N. Schneider, D. J. Vimont, A. S. Phillips, J. D. Scott and C. A. Smith, 2016: The Pacific Decadal Oscillation, revisited. Journal of Climate, 29, 4399-4427.

Seo, H., A. J. Miller and J. R Norris, 2016: Eddy-wind interaction in the California Current System: Dynamics and impacts. Journal of Physical Oceanography, 46, 439-459.

DeFlorio, M. J., I. D. Goodwin, D. R. Cayan, A. J. Miller, S. J. Ghan, D. W. Pierce, L. M. Russell and B. Singh, 2016: Interannual modulation of subtropical Atlantic boreal summer dust variability by ENSO. Climate Dynamics, 46, 585-599.

Amaya, D., S.-P. Xie, A. J. Miller and M. J. McPhaden, 2015: Seasonality of tropical Pacific decadal trends associated with the 21st century global warming hiatus. Journal of Geophysical Research-Oceans, 120, 6782-6798.

Rasmussen, L., P. D. Bromirski, A. J. Miller, D. Arcas, R. E. Flick and M. C. Hendershott, 2015: Source location impact on relative tsunami strength along the U.S. West Coast. Journal of Geophysical Research-Oceans, 120, 4945-4961.

Bakun, A., B. A. Black, S. J. Bograd, M. Garcia-Reyes, A. J. Miller, R. R. Rykaczewski and W. J. Sydeman, 2015: Anticipated effects of climate change on coastal upwelling ecosystems. Current Climate Change Reports, 1, 85-93.

Xu, L., D. W. Pierce, L. M. Russell, A. J. Miller, R. C. J. Somerville, C. H. Twohy, S.J. Ghan, B. Singh, J.-H. Yoon, and P. J. Rasch, 2015: Interannual to decadal climate variability of sea salt aerosols in the coupled climate model CESM1.0 Journal of Geophysical Research-Atmospheres, 120, 1502-1519.

Cavanaugh, N. R., T. Allen, A. Subramanian, B. Mapes, H. Seo and A. J. Miller, 2015: The skill of atmospheric linear inverse models in hindcasting the Madden-Julian Oscillation. Climate Dynamics, 44, 897-906.

Miller, A. J., H. Song and A. C. Subramanian, 2015: The physical oceanographic environment during the CCE-LTER years: Changes in climate and concepts. Deep-Sea Research II, 112, 6-17.

Seo, H., A. C. Subramanian, A. J. Miller, and N. R. Cavanaugh, 2014: Coupled impacts of the diurnal cycle of sea surface temperature on the Madden-Julian Oscillation. Journal of Climate, 27, 8422-8443.

Li, L., A. J. Miller, J. L. McClean, I. Eisenman and M. C. Hendershott, 2014: Processes driving sea ice variability in the Bering Sea in an eddying ocean/sea ice model: Anomalies from the mean seasonal cycle. Ocean Dynamics, 64, 1693-1717.

Li, L., J. L. McClean, A. J. Miller, I. Eisenman, M. C. Hendershott and C. A. Papadopoulos, 2014: Processes driving sea ice variability in the Bering Sea in an eddying ocean/sea ice model: Mean seasonal cycle. Ocean Modelling, 84, 51-66.

DeFlorio, M. J., S. J. Ghan, B. Singh, A. J. Miller, D. R. Cayan, L. M. Russell and R. C. J. Somerville, 2014: Semi-direct dynamical and radiative effect of North African dust transport on lower tropospheric clouds over the subtropical North Atlantic in CESM 1.0. Journal of Geophysical Research-Atmospheres, 119, 8284-8303.

Subramanian, A., M. Jochum, A. J. Miller, R. Neale, H. Seo, D. Waliser and R. Murtugudde, 2014: The MJO and global warming: A study in CCSM4. Climate Dynamics, 42, 2019-2031.

Moon, J.-H., Y. T. Song, P. D. Bromirski and A. J. Miller, 2013: Multi-decadal regional sea level shifts in the Pacific over 1958-2008. Journal of Geophysical Research-Oceans, 118, doi:10.1002/2013JC009297.

Freeman, L. A., J. A. Kleypas and A. J. Miller, 2013: Coral reef habitat response to climate change scenarios. PLoS ONE, 8, e82404. doi:10.1371/journal.pone.0082404.

Ohman, M. D., K. Barbeau, P. J. S. Franks, R. Goericke, M. D. Landry and A. J. Miller, 2013: Ecological transitions in a coastal upwelling ecosystem. Oceanography, 26, 210-219.

Franks, P. J. S., E. Di Lorenzo, N. L. Goebel, F. Chenillat, P. Riviere, C. A. Edwards and A. J. Miller, 2013: Modeling physical-biological responses to climate change in the California Current System. Oceanography, 26, 26-33.

DeFlorio, M. J., D. W. Pierce, D. R. Cayan and A. J. Miller, 2013: Western U.S. extreme precipitation events and their relation to ENSO and PDO in CCSM4. Journal of Climate, 26, 4231-4243.

Putrasahan, D. A., A. J. Miller and H. Seo, 2013: Isolating mesoscale coupled ocean-atmosphere interactions in the Kuroshio Extension region. Dynamics of Atmospheres and Oceans, 63, 60-78.

Putrasahan, D. A., A. J. Miller and H. Seo, 2013: Regional coupled ocean-atmosphere downscaling in the Southeast Pacific: Impacts on upwelling, mesoscale air-sea fluxes, and ocean eddies. Ocean Dynamics, 63, 463-488.

Subramanian, A. C., A. J. Miller, B. D. Cornuelle, E. Di Lorenzo, R. A. Weller and F. Straneo, 2013: A data assimilative perspective of oceanic mesoscale eddy evolution during VOCALS-REx Atmospheric Chemistry and Physics, 13, 3329-3344.

Subramanian, A. C., I. Hoteit, B. Cornuelle, A. J. Miller and H. Song, 2012: Linear vs. nonlinear filtering with scale selective corrections for balanced dynamics in a simple atmospheric model. Journal of the Atmospheric Sciences, 69, 3405-3419.

Song, H., A. J. Miller, S. McClatchie, E. D. Weber, K. M. Nieto and D. M. Checkley, 2012: Application of a data-assimilation model to variability of Pacific sardine spawning and survivor habitats with ENSO in the California Current System. Journal of Geophysical Research-Oceans, 117, C03009, doi:10.1029/2011JC007302.

Freeman, L. A., A. J. Miller, R. D. Norris and J. E. Smith, 2012: Classification of remote Pacific coral reefs by physical oceanographic environment. Journal of Geophysical Research-Oceans, 117, C02007, doi.org/10.1029/2011JC007099.

Bromirski, P. D., A. J. Miller and R. E Flick, 2012: Understanding North Pacific sea level trends. Eos, Transactions, American Geophysical Union, 93, 249-256.

Macias, D., M. R. Landry, A. Gershunov, A. J. Miller and P. S. Franks, 2012: Climatic control of upwelling variability along the western North-American Coast. PLoS ONE, 7, e30436, doi:10.1371/journal.pone.0030436.

Subramanian, A. C., M. Jochum, A. J. Miller, R. Murtugudde, R. B. Neale and D. E. Waliser, 2011: The Madden Julian Oscillation in CCSM4. Journal of Climate, 24, 6261-6282.

Bromirski, P. D., A. J. Miller, R. E Flick and G. Auad, 2011: Dynamical suppression of sea level rise along the Pacific Coast of North America: Indications for imminent acceleration. Journal of Geophysical Research-Oceans, 116, C07005, doi:10.1029/2010JC006759.

Song, H., A. J. Miller, B. D. Cornuelle and E. Di Lorenzo, 2011: Changes in upwelling and its water sources in the California Current System driven by different wind forcing. Dynamics of Atmospheres and Oceans, 52, 170-191.

Yeh, S.-W., Y.-J. Kang, Y. Noh and A. J. Miller, 2011: The North Pacific climate transitions of the winters of 1976/77 and 1988/89. Journal of Climate, 24, 1170-1183.

Ito, S.-I., K. A. Rose, A. J. Miller, K. Drinkwater, K. M. Brander, J. E. Overland, S. Sundby, E. Curchitser, J. W. Hurrell and Y. Yamanaka, 2010: Ocean ecosystem responses to future global change scenarios: A way forward. In: Global Change and Marine Ecosystems, M. Barange, J. Field, R. Harris, E. Hofmann, I. Perry and F. Werner, Eds., Oxford University Press, pp. 287-322.

Overland, J. E., J. Alheit, A. Bakun, J. W. Hurrell, D. L. Mackus and A. J. Miller, 2010: Climate controls on marine ecosystems and fish populations. Journal of Marine Systems, 79, 305-315.

Seo, H., S.-P. Xie, R. Murtugudde, M. Jochum and A. J. Miller, 2009: Seasonal effects of Indian Ocean freshwater forcing in a regional coupled model. Journal of Climate, 22, 6577-6596.

Di Lorenzo, E., J. Fiechter, N. Schneider, A. Bracco, A. J. Miller, P. J. S. Franks, S. J. Bograd, A. M. Moore, A. C. Thomas, W. Crawford, A. Pena and A. J. Hermann, 2009: Nutrient and salinity decadal variations in the central and eastern North Pacific. Geophysical Research Letters, 36, L14601, doi:10.1029/2009GL038261.

Kim, H.-J., A. J. Miller, J. McGowan and M. Carter, 2009: Coastal phytoplankton blooms in the Southern California Bight. Progress in Oceanography, 82, 137-147.

Capotondi, A., V. Combes, M. A. Alexander, E. Di Lorenzo and A. J. Miller, 2009: Low-frequency variability in the Gulf of Alaska from coarse and eddy-permitting ocean models. Journal of Geophysical Research-Oceans, 114, C01017, doi:10.1029/2008JC004983.

Moore, A. M., H. G. Arango, E. Di Lorenzo, A. J. Miller and B. D. Cornuelle, 2009: An adjoint sensitivity analysis of the Southern California Current circulation and ecosystem. Journal of Physical Oceanography, 39, 702-720.

Seo, H., R. Murtugudde, M. Jochum and A. J. Miller, 2008: Modeling of mesoscale coupled ocean-atmosphere interaction and its feedback to ocean in the western Arabian Sea. Ocean Modelling, 25, 120-131.

Muccino, J. C., H. G. Arango, A. B. Bennett, B. S. Chua, B. D. Cornuelle, E. Di Lorenzo, G. D. Egbert, D. Haivogel, L. Hao, J. C. Levin, A. J. Miller, A. M. Moore and E. D. Zaron, 2008: The Inverse Ocean Modeling System. II: Applications. Journal of Atmospheric and Oceanic Technology, 25, 1623-1637.

Di Lorenzo, E., N. Schneider, K. M. Cobb, P. J. S. Franks, K. Chhak, A. J. Miller, J. C. McWilliams, S. J. Bograd, H. Arango, E. Curchitser, T. M. Powell and P. Riviere, 2008: North Pacific Gyre Oscillation links ocean climate and ecosystem change. Geophysical Research Letters, 35, L08607, doi:10.1029/2007GL032838.

Seo, H., M. Jochum, R. Murtugudde, A. J. Miller and J. O. Roads, 2008: Precipitation from African Easterly Waves in a coupled model of the tropical Atlantic. Journal of Climate, 21, 1417-1431.

Alexander, M., A. Capotondi, A. Miller, F. Chai, R. Brodeur and C. Deser, 2008: Decadal variability in the Northeast Pacific in a physical-ecosystem model: Role of mixed layer depth and trophic interactions. Journal of Geophysical Research-Oceans, 113, C02017, doi:10.1029/2007JC004359.

Haidvogel, D. B., H. Arango, W. P. Budgell, B. D. Cornuelle, E. Curchitser, E. Di Lorenzo, K. Fennel, W. R. Geyer, A. J. Hermann, L. Lanerolle, J. Levin, J. C. McWilliams, A. J. Miller, A. M. Moore, T. M. Powell, A. F. Shchepetkin, C. R. Sherwood, R. P. Signell, J. C. Warner, and J. Wilkin, 2008: Ocean forecasting in terrain-following coordinates: Formulation and skill assessment of the Regional Ocean Modeling System. Journal of Computational Physics, 227, 3595-3624.

Auad, G. and A. J. Miller, 2008: The role of tidal forcing in the Gulf of Alaska's circulation. Geophysical Research Letters, 35, L02602, doi:10.1029/2007GL031611.

Miller, A. J., D. J. Neilson, D. S. Luther, M. C. Hendershott, B. D. Cornuelle, P. F. Worcester, M. A. Dzieciuch, B. D. Dushaw, B. M. Howe, J. C. Levin, H. G. Arango and D. B. Haidvogel, 2007: Barotropic Rossby wave radiation from a model Gulf Stream. Geophysical Research Letters, 34, L23613, doi:10.1029/2007GL031937.

Seo, H., M. Jochum, R. Murtugudde, A. J. Miller and J. O. Roads, 2007: Feedback of Tropical Instability Wave-induced atmospheric variability onto the ocean. Journal of Climate, 20, 5842-5855.

Kim, H-J. and A. J. Miller, 2007: Did the thermocline deepen in the southern California Current after the 1976-77 climate regime shift? Journal of Physical Oceanography, 37, 1733-1739.

Seo, H., A. J. Miller and J. O Roads, 2007: The Scripps Coupled Ocean-Atmosphere Regional (SCOAR) model, with applications in the eastern Pacific sector. Journal of Climate, 20, 381-402.

Di Lorenzo, E., A. M. Moore, H. G. Arango, B. D. Cornuelle, A. J. Miller, B. Powell, B. S. Chua and A. F. Bennett, 2007: Weak and strong constraint data assimilation in the inverse Regional Ocean Modeling System (ROMS): Development and application for a baroclinic coastal upwelling system. Ocean Modelling, 16, 160-187.

Trites, A. W., A. J. Miller, H. D. G. Maschner, M. A. Alexander, S. J. Bograd, J. A. Calder, A. Capotondi, K. O. Coyle, E. Di Lorenzo, B. P. Finney, E. J. Gregr, C. E. Grosch, S. R. Hare, G. L. Hunt, J. Jahncke, N. B. Kachel, H.-J. Kim, C. Ladd, N. J. Mantua, C. Marzban, W. Maslowski, R. Mendelssohn, D. J. Neilson, S. R. Okkonen, J. E. Overland, K. L. Reedy-Maschner, T. C. Royer, F. B. Schwing, J. X. L. Wang and A. J. Winship, 2007: Bottom-up forcing and the decline of Steller sea lions (Eumetopias jubatus) in Alaska: Assessing the ocean climate hypothesis. Fisheries Oceanography, 16, 46-67.

Miller, A. J., A. J. Gabric, J. R. Moisan, F. Chai, D. J. Neilson, D. W. Pierce, and E. Di Lorenzo, 2006: Global change and oceanic primary productivity: Effects of ocean-atmosphere-biological feedbacks. In: Global Climate Change and Response of the Carbon Cycle in the Equatorial Pacific and Indian Oceans and Adjacent Land Masses, H. Kawahata and Y. Awaya, Eds., Elsevier Oceanography Series, 73, pp. 29-65.

Auad, G., A. Miller and E. Di Lorenzo, 2006: Long term forecast of oceanic conditions off California and biological implications. Journal of Geophysical Research-Oceans, 111, C09008, doi:10.1029/2005JC003219.

Mestas-Nunez, A. M. and A. J. Miller, 2006: Interdecadal variability and climate change in the Eastern Tropical Pacific: A review. Progress in Oceanography, 69, 267-284.

Seo, H., M. Jochum, R. Murtugudde and A. J. Miller, 2006: Effect of ocean mesoscale variability on the mean state of tropical Atlantic climate. Geophysical Research Letters, 33, L09606, doi:10.1029/2005GL025651.

Capotondi, A., M. A. Alexander, C. Deser and A. J. Miller, 2005: Low-frequency pycnocline variability in the Northeast Pacific. Journal of Physical Oceanography, 35, 1403-1420.

Bograd, S. J., R. Mendelssohn, F. B. Schwing and A. J. Miller, 2005: Spatial heterogeneity of sea surface temperature trends in the Gulf of Alaska. Atmosphere-Ocean, 43, 241-247.

Miller, A. J., E. Di Lorenzo, D. J. Neilson, H.-J. Kim, A. Capotondi, M. A. Alexander, S. J. Bograd, F. B. Schwing, R. Mendelssohn, K. Hedstrom and D. L. Musgrave, 2005: Interdecadal changes in mesoscale eddy variance in the Gulf of Alaska circulation: Possible implications for the Steller sea lion decline. Atmosphere-Ocean, 43, 231-240.

Di Lorenzo, E., A. J. Miller, N. Schneider and J. C. McWilliams, 2005: The warming of the California Current: Dynamics and ecosystem implications. Journal of Physical Oceanography, 35, 336-362.

Moisan, J. R., A. J. Miller, E. Di Lorenzo and J. Wilkin, 2005: Modeling and data assimilation. In: Remote Sensing in Coastal Aquatic Environments, R. L. Miller, C. E. Del Castillo, and B. A. McKee, Eds., Springer, Dordrecht, The Netherlands, pp. 229-257.

Auad, G., A. J. Miller and J. O. Roads, 2004: Pacific Ocean forecasts. Journal of Marine Systems, 45, 75-90.

Di Lorenzo, E., A. J. Miller, D. J. Neilson, B. D. Cornuelle and J. R. Moisan, 2004: Modeling observed California Current mesoscale eddies and the ecosystem response. International Journal of Remote Sensing, 25, 1307-1312.

Moore, A. M., H. G. Arango, E. Di Lorenzo, B. D. Cornuelle, A. J. Miller and D. J. Neilson, 2004: A comprehensive ocean prediction and analysis system based on the tangent linear and adjoint of a regional ocean model. Ocean Modelling, 7, 227-258.

Miller, A. J., F. Chai, S. Chiba, J. R. Moisan and D. J. Neilson, 2004: Decadal-scale climate and ecosystem interactions in the North Pacific Ocean. Journal of Oceanography, 60, 163-188.

Auad, G., J. P. Kennett and A. J. Miller, 2003: The North Pacific Intermediate Water response to a modern climate shift. Journal of Geophysical Research-Oceans, 108, 3349, doi:10.1029/2003JC001987.

McGowan, J. A., S. J. Bograd, R. J. Lynn and A. J. Miller, 2003: The biological response to the 1977 regime shift in the California Current. Deep-Sea Research, 50, 2567-2582.

Miller, A. J., M. A. Alexander, G. J. Boer, F. Chai, K. Denman, D. J. Erickson, R. Frouin, A. J. Gabric, E. A. Laws, M. R. Lewis, Z. Liu, R. Murtugudde, S. Nakamoto, D. J. Neilson, J. R. Norris, J. C. Ohlmann, R. I. Perry, N. Schneider, K. M. Shell, and A. Timmermann, 2003: Potential feedbacks between Pacific Ocean ecosystems and interdecadal climate variations. Bulletin of the American Meteorological Society, 84, 617-633.

Schneider, N., A. J. Miller and D. W. Pierce, 2002: Anatomy of North Pacific decadal variability. Journal of Climate, 15, 586-605.

Schneider, N. and A. J. Miller, 2001: Predicting western North Pacific Ocean climate. Journal of Climate (letters), 14, 3997-4002.

Auad, G., A. J. Miller, J. O. Roads and D. R. Cayan, 2001: Pacific Ocean wind stresses and surface heat fluxes from the NCEP Reanalysis and observations: Cross-statistics and ocean model responses. Journal of Geophysical Research-Oceans, 106, 22,249-22,265.

Miller, A. J., E. Di Lorenzo, D. J. Neilson, B. D. Cornuelle and J. R. Moisan, 2000: Modeling CalCOFI observations during El Nino: Fitting physics and biology. California Cooperative Oceanic Fisheries Investigations Reports, 41, 87-97.

Miller, A. J. and N. Schneider, 2000: Interdecadal climate regime dynamics in the North Pacific Ocean: Theories, observations and ecosystem impacts. Progress in Oceanography, 47, 355-379.

Miller, A. J., J. C. McWilliams, N. Schneider, J. S. Allen, J. A. Barth, R. C. Beardsley, F. P. Chavez, T. K. Chereskin, C. A. Edwards, R. L. Haney, K. A. Kelly, J. C. Kindle, L. N. Ly, J. R. Moisan, M. A. Noble, P. P. Niiler, L. Y. Oey, F. B. Schwing, R. K. Shearman, and M. S. Swenson, 1999: Observing and modeling the California Current System. Eos, Transactions, American Geophysical Union, 80, 533-539.

Miller, A. J. and B. D. Cornuelle, 1999: Forecasts from fits of frontal fluctuations. Dynamics of Atmospheres and Oceans, 29, 305-333.

Schneider, N., S. Venzke, A. J. Miller, D. W. Pierce, T. P. Barnett, C. Deser and M. Latif, 1999: Pacific thermocline bridge revisited. Geophysical Research Letters, 26, 1329-1332.

Schneider, N., A. J. Miller, M. A. Alexander and C. Deser, 1999: Subduction of decadal North Pacific temperature anomalies: Observations and dynamics. Journal of Physical Oceanography, 29, 1056-1070.

Auad, G., A. J. Miller and W. B. White, 1998: Simulation of heat storages and associated heat budgets in the Pacific Ocean - 1. El Nino Southern Oscillation timescale. Journal of Geophysical Research-Oceans, 103, 27,603-27,620.

Auad, G., A. J. Miller and W. B. White, 1998: Simulation of heat storages and associated heat budgets in the Pacific Ocean - 2. Interdecadal timescale. Journal of Geophysical Research-Oceans,, 103, 27,621-27,636.

Miller, A. J., D. R. Cayan and W. B. White, 1998: A westward-intensified decadal change in the North Pacific thermocline and gyre-scale circulation. Journal of Climate, 11, 3112-3127.

Miller, A. J., W. B. White and D. R. Cayan, 1997: North Pacific thermocline variations on ENSO time scales. Journal of Physical Oceanography, 27, 2023-2039.

Miller, A. J., P. F. G. Lermusiaux and P.-M. Poulain, 1996: A topographic-Rossby mode resonance over the Iceland-Faeroe Ridge. Journal of Physical Oceanography, 26, 2735-2747.

Nese, J. M., A. J. Miller and J. A. Dutton, 1996: The nature of predictability enhancement in a low-order ocean-atmosphere model. Journal of Climate, 9, 2167-2172.

Miller, A. J., 1996: Recent advances in California Current modeling: Decadal and interannual thermocline variations. In: California Cooperative Oceanic Fisheries Investigations Reports, 37, 69-79.

Robinson, A. R., H. G. Arango, A. Warn-Varnas, W. G. Leslie, A. J. Miller, P. J. Haley and C. J. Lozano, 1996: Real-time regional forecasting. In: Modern Approaches to Data Assimilation in Ocean Modeling, P. Malanotte-Rizzoli, ed., Elsevier Science, B.V., pp. 377-410.

Robinson, A. R., H. G. Arango, A. J. Miller, P.-M. Poulain, A. Warn-Varnas and W. G. Leslie, 1996: Real time operational forecasting on shipboard of the Iceland-Faroe frontal variability. Bulletin of the American Meteorological Society, 77, 243-259.

Cayan, D. R., A. J. Miller, T. P. Barnett, N. E. Graham, J. N. Ritchie and J. M. Oberhuber, 1995: Seasonal-interannual fluctuations in surface temperature over the Pacific: Effects of monthly winds and heat fluxes. In: Natural Climate Variability on Decadal-to-Century Time Scales, National Academy Press, pp. 133-150.

Miller, A. J., P.-M. Poulain, A. R. Robinson, H. G. Arango, W. G. Leslie and A. Warn-Varnas, 1995: Quantitative skill of quasigeostrophic forecasts of a baroclinically unstable Iceland-Faroe Front. Journal of Geophysical Research-Oceans, 100, 10,833-10,849.

Miller, A. J., H. G. Arango, A. R. Robinson, W. G. Leslie, P.-M. Poulain and A. Warn-Varnas, 1995: Quasigeostrophic forecasting and physical processes of Iceland-Faroe Frontal variability. Journal of Physical Oceanography, 25, 1273-1295.

Miller, A. J., D. R. Cayan, T. P. Barnett, N. E. Graham and J. M. Oberhuber, 1994: The 1976-77 climate shift of the Pacific Ocean. Oceanography, 7, 21-26.

Miller, A. J., D. R. Cayan, T. P. Barnett, N. E. Graham and J. M. Oberhuber, 1994: Interdecadal variability of the Pacific Ocean: Model response to observed heat flux and wind stress anomalies. Climate Dynamics, 9, 287-302.

Miller, A. J., T. P. Barnett and N. E. Graham, 1993: A comparison of some tropical ocean models: Hindcast skill and El Nino evolution. Journal of Physical Oceanography, 23, 1567-1591.

Miller, A. J., D. S. Luther and M. C. Hendershott, 1993: The fortnightly and monthly tides: Resonant Rossby waves or nearly equilibrium gravity waves? Journal of Physical Oceanography, 23, 879-897.

Miller, A. J., J. M. Oberhuber, N. E. Graham and T. P. Barnett, 1992: Tropical Pacific Ocean response to observed winds in a layered ocean general circulation model. Journal of Geophysical Research-Oceans, 97, 7317-7340.

Miller, A. J., 1992: On forced barotropic vorticity oscillations. Journal of Physical Oceanography, 22, 808-810.

Miller, A. J., 1992: Large-scale ocean-atmosphere interactions in a simplified coupled model of the midlatitude wintertime circulation. Journal of the Atmospheric Sciences, 49, 273-286.

Miller, A. J. and J. O. Roads, 1990: A simplified coupled model of extended-range predictability. Journal of Climate, 3, 523-542.

Miller, A. J., 1989: On the barotropic planetary oscillations of the Pacific. Journal of Marine Research, 47, 569-594.

Miller, A. J., W. R. Holland and M. C. Hendershott, 1987: Open-ocean response and normal mode excitation in an eddy-resolving general circulation model. Geophysical & Astrophysical Fluid Dynamics, 37, 253-278.

Miller, A. J., 1986: Non-divergent planetary oscillations in mid-latitude ocean basins with continental shelves. Journal of Physical Oceanography, 16, 1914-1928.

Miller, A. J., 1986: Barotropic planetary-topographic oscillations in ocean basins. Ph.D. dissertation. Scripps Institution of Oceanography, University of California, San Diego, 133 pp.